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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889392.1_cds_XP_016444081.1_39181
CDS Infomation

[gene=LOC107769386] [db_xref=GeneID:107769386] [protein=protein RIK-like isoform X2] [protein_id=XP_016444081.1] [location=complement(join(601..1138,1283..1400,1541..1634,2148..2234,2311..2406,3130..3205,3287..3321,3432..3530,3954..4088))] [gbkey=CDS]
Sequence

ATGGGATCTCTTGCTGGTGTCCCATTACCCGGTGTAGCTCCAGTCTTAGGTGCTGCTTTT
ATGAATCCTCTTACCGCTATTGGTGCTACTACAGTGCAGCAGCATCCTCTCATTGTTGCC
CAAAACTTAATTCAACCGAAAATTCAGGATGAGTTGATAGCAAGAGAAATTGTCATTAAT
GACGCTGATCCGGCTGTTCGCTACAGGCTCACAAAGCGCCAAACCCAGGAAGAGATTCAG
AAGAGCTCGGGTGCTGTGGTTATAACTAGGGGTAGATACAGGCCTCCAAATGCACCATCT
GATGGTGAAAAACCCCTCTACCTTCATATTTCTGCTGGGGCACATCTAGAAACAACACTG
GAGAGGATCAAAGCAGTTGATCGTGCTGCTGCTATAGTGGAGGAAATGCTGAAGCAAGGT
ACTGTTAACAATGGATTGAAGGTCAATCATCTGCTTAGCACCTGTGTCTACCTGGGCTTT
GATGCTGATCCATCAGCAAATATTGCTGCGCGCATTCGTGGACCAAATGATCAGTATATA
AATCACATTATAAATGAAACTGGAGCGACTGTCTTGCTACGAGGGCGTGGTATGGGATAT
TCAGATGGAGAACAGGGTGAAGATTTGCATCAACCTCTGCATTTACTCATATCAAGCAAT
AACAGTGCAAGTCTTGAGCGTGCAAAGCTTTTGGCAGAAAATCTTTTGGATACTATATGT
GCAGAGTGTGGTGCTTCTAGAGTCTCTTCTTGTAAGGTTTATGGTGCTGTTCCACCTCCA
CCACAACCATTAGCCAGCATTCAGGGTTCTGGAAGTGAATCAGAAGTCAATAACATACCT
GCAGCCAATGTAGCTGCACAGATTCTGAGCTCCACAACAGCAGCAGCAGTTCCCGTGACT
GCAGCTGCAGGTGTGACTAATGTTGTTTCTCAGGGTACAGTGCCTCAATCTGTTGGTTCA
CTGAATCCTGTGCCATCTCAACCTCCCACCGGTTGCTATCCTCATCAATTAGTTACAAGT
AGAACAAGCTATATTGGTTATGATGGTATATATCCACAAGCCACTCCTCTGCAGCAAGTT
GCTTTGGCTCTTAGGCATTCTACTTCTCCAGTCACTGCCACAGTTGCTCCGGCAACAACA
GGAGCAAGCATCACTTCACAGACAAGTATAGGTTCTGAGAAGGACAAGCGCCCTGCACAG
AAGCGTAAATTTCAGGAGCTGCCGGCTGCTGGAAAGAGCCAAGTAACTGTAAACCAGGTA
TGTGCTAAATCTCCTTGA

Peptide Sequence

PEP ID

XP_016444081.1
PEP Infomation

PREDICTED: protein RIK-like isoform X2 [Nicotiana tabacum]
Sequence

MGSLAGVPLPGVAPVLGAAFMNPLTAIGATTVQQHPLIVAQNLIQPKIQDELIAREIVIN
DADPAVRYRLTKRQTQEEIQKSSGAVVITRGRYRPPNAPSDGEKPLYLHISAGAHLETTL
ERIKAVDRAAAIVEEMLKQGTVNNGLKVNHLLSTCVYLGFDADPSANIAARIRGPNDQYI
NHIINETGATVLLRGRGMGYSDGEQGEDLHQPLHLLISSNNSASLERAKLLAENLLDTIC
AECGASRVSSCKVYGAVPPPPQPLASIQGSGSESEVNNIPAANVAAQILSSTTAAAVPVT
AAAGVTNVVSQGTVPQSVGSLNPVPSQPPTGCYPHQLVTSRTSYIGYDGIYPQATPLQQV
ALALRHSTSPVTATVAPATTGASITSQTSIGSEKDKRPAQKRKFQELPAAGKSQVTVNQV
CAKSP

Transcript Sequence

Gene sequence data has not been registered.